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1

Insights into autosomal dominant polycystic kidney disease by quantitative mass spectrometry-based proteomics

Diedrich, Britta, Dengjel, Jörn

Journal:

Cell and Tissue Research

Year:

2017

Language:

english

File:

PDF, 930 KB

english, 2017

2

Targeting GATA transcription factors – a novel strategy for anti-aging interventions?

Zimmermann, Andreas, Kainz, Katharina, Hofer, Sebastian J., Bauer, Maria A., Schroeder, Sabrina, Dengjel, Jörn, Pietrocola, Federico, Kepp, Oliver, Ruckenstuhl, Christoph, Eisenberg, Tobias, Sigrist,

Journal:

Year:

2019

Language:

english

File:

PDF, 367 KB

english, 2019

3

Targeting GATA transcription factors – a novel strategy for anti-aging interventions?

Zimmermann, Andreas, Kainz, Katharina, Hofer, Sebastian J., Bauer, Maria A., Schroeder, Sabrina, Dengjel, Jörn, Pietrocola, Federico, Kepp, Oliver, Ruckenstuhl, Christoph, Eisenberg, Tobias, Sigrist,

Journal:

Year:

2019

File:

PDF, 367 KB

2019

4

Phosphoproteomic profiling reveals a defined genetic program for osteoblastic lineage commitment of human bone marrow–derived stromal stem cells

Barrio-Hernandez, Inigo, Jafari, Abbas, Rigbolt, Kristoffer T.G., Hallenborg, Philip, Sanchez-Quiles, Virginia, Skovrind, Ida, Akimov, Vyacheslav, Kratchmarova, Irina, Dengjel, Joern, Kassem, Moustaph

Journal:

Genome Research

Year:

2019

File:

PDF, 7.48 MB

2019

5

Identification of a naturally processed cyclin D1 T-helper epitope by a novel combination of HLA class II targeting and differential mass spectrometry

Jörn Dengjel, Patrice Decker, Oliver Schoor, Florian Altenberend, Toni Weinschenk, Hans-Georg Rammensee, Stefan Stevanovic

Journal:

European Journal of Immunology

Year:

2004

Language:

english

File:

PDF, 188 KB

english, 2004

6

Correction: Identification of a naturally processed cyclin D1 T-helper epitope by a novel combination of HLA class II targeting and differential mass spectrometry (Vol. 34(12) 2004, p. 3644–3651)

Jörn Dengjel, Patrice Decker, Oliver Schoor, Florian Altenberend, Toni Weinschenk, Hans-Georg Rammensee, Stefan Stevanovic

Journal:

European Journal of Immunology

Year:

2005

Language:

english

File:

PDF, 30 KB

english, 2005

7

Glycan side chains on naturally presented MHC class II ligands

Jörn Dengjel, Hans-Georg Rammensee, Stefan Stevanovic

Journal:

Journal of Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 227 KB

english, 2005

8

The Tübingen approach: identification, selection and validation of tumor-associated HLA peptides for cancer therapy

H Singh, T Weinschenk, C Lemmel, O Schoor, J Dengjel, C Gouttefangeas, S Stevanovic, P Brossart, H-G Rammensee

Journal:

Cancer Cell International

Year:

2004

Language:

english

File:

PDF, 192 KB

english, 2004

9

ErbB2-associated changes in the lysosomal proteome

Jesper Nylandsted, Andrea C. Becker, Jakob Bunkenborg, Jens S. Andersen, Jörn Dengjel, Marja Jäättelä

Journal:

Year:

2011

Language:

english

File:

PDF, 424 KB

english, 2011

10

Autophagy in innate and adaptive immunity against intracellular pathogens

Dorothee Schmid, Jörn Dengjel, Oliver Schoor, Stefan Stevanovic, Christian Münz

Journal:

Journal of Molecular Medicine

Year:

2006

Language:

english

File:

PDF, 199 KB

english, 2006

11

Peptide motif for the rat MHC class II molecule RT1.Da: similarities to the multiple sclerosis-associated HLA-DRB1*1501 molecule

Hüseyin Duyar, Jörn Dengjel, Katrien L. de Graaf, Karl-Heinz Wiesmüller, Stefan Stevanović, Robert Weissert

Journal:

Year:

2005

Language:

english

File:

PDF, 185 KB

english, 2005

12

Lessons to be learned from primary renal cell carcinomas: novel tumor antigens and HLA ligands for immunotherapy

Tobias Krüger, Oliver Schoor, Claudia Lemmel, Bjoern Kraemer, Christian Reichle, Jörn Dengjel, Toni Weinschenk, Margret Müller, Jörg Hennenlotter, Arnulf Stenzl, Hans-Georg Rammensee, Stefan Stevanovi

Journal:

Cancer Immunology, Immunotherapy

Year:

2005

Language:

english

File:

PDF, 420 KB

english, 2005

13

Relevance of the inner mitochondrial membrane enzyme F1F0-ATPase as an autoantigen in autoimmune liver disorders

Beate Preuß, Christoph Berg, Jörn Dengjel, Stefan Stevanovic, Reinhild Klein

Journal:

Liver International

Year:

2012

Language:

english

File:

PDF, 318 KB

english, 2012

14

Quantitative proteomic assessment of very early cellular signaling events

Dengjel, Joern, Akimov, Vyacheslav, Olsen, Jesper V, Bunkenborg, Jakob, Mann, Matthias, Blagoev, Blagoy, Andersen, Jens S

Journal:

Nature Biotechnology

Year:

2007

Language:

english

File:

PDF, 191 KB

english, 2007

15

Differential quantitative analysis of MHC ligands by mass spectrometry using stable isotope labeling

Kratt, Thomas, Becker, Horst-Dieter, Rammensee, Hans-Georg, Stevanović, Stefan, Lemmel, Claudia, Weik, Steffen, Eberle, Ute, Dengjel, Jörn

Journal:

Nature Biotechnology

Year:

2004

Language:

english

File:

PDF, 383 KB

english, 2004

16

Arf1p, Chs5p and the ChAPs are required for export of specialized cargo from the Golgi

Trautwein, Mark, Schindler, Christina, Gauss, Robert, Dengjel, Jörn, Hartmann, Enno, Spang, Anne

Journal:

The EMBO Journal

Year:

2006

Language:

english

File:

PDF, 533 KB

english, 2006

17

From Bioconjugation to Self-Assembly in Nanobiotechnology: Quantum Dots Trapped and Stabilized by Toroid Protein Yoctowells

Andreas Schreiber, Ying Yuan, Matthias C. Huber, Ralf Thomann, Andreas Ziegler, Helmut Cölfen, Jörn Dengjel, Michael Krüger, Stefan M. Schiller

Journal:

Advanced Engineering Materials

Year:

2012

Language:

english

File:

PDF, 691 KB

english, 2012

18

Autoimmune T cell responses to antigenic peptides presented by bronchoalveolar lavage cell HLA-DR molecules in sarcoidosis

Jan Wahlström, Jörn Dengjel, Ola Winqvist, Ira Targoff, Bengt Persson, Hüseyin Duyar, Hans-Georg Rammensee, Anders Eklund, Robert Weissert, Johan Grunewald

Journal:

Clinical Immunology

Year:

2009

Language:

english

File:

PDF, 423 KB

english, 2009

19

Strategy for Identifying Dendritic Cell-Processed CD4+ T Cell Epitopes from the HIV Gag p24 Protein

Bozzacco, Leonia, Yu, Haiqiang, Dengjel, Jörn, Trumpfheller, Christine, Zebroski, Henry A., Zhang, Nawei, Küttner, Victoria, Ueberheide, Beatrix M., Deng, Haiteng, Chait, Brian T., Steinman, Ralph M.,

Journal:

Year:

2012

Language:

english

File:

PDF, 1.42 MB

english, 2012

20

Identification of α-tubulin as an autoantigen recognized by sera from patients with neuropsychiatric systemic lupus erythematosus

Mathias Ndhlovu, Beate E. Preuß, Jörn Dengjel, Stefan Stevanovic, Stefan M. Weiner, Reinhild Klein

Journal:

Brain, Behavior, and Immunity

Year:

2011

Language:

english

File:

PDF, 407 KB

english, 2011

21

Analysis of polymorphic sites in the promoter of the nitric oxide synthase 2 gene

Valentina Coia, Simone Jüliger, Benjamin Mordmüller, Andrea Kreidenweis, Anna-Lena Stroh, Claudia Ortega, Alessandro Vindigni, Jörn Dengjel, Dmitry V. Lukyanov, Giovanni Destro-Bisol, Anton Fedorov, O

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 326 KB

english, 2005

22

Matrix Protein 2 of Influenza A Virus Blocks Autophagosome Fusion with Lysosomes

Monique Gannagé, Dorothee Dormann, Randy Albrecht, Jörn Dengjel, Tania Torossi, Patrick C. Rämer, Monica Lee, Till Strowig, Frida Arrey, Gina Conenello, Marc Pypaert, Jens Andersen, Adolfo García-Sast

Journal:

Cell Host & Microbe

Year:

2009

Language:

english

File:

PDF, 2.34 MB

english, 2009

23

543 Identification of F1-ATPase as a new target antigen of antimitochondrial antibodies (AMA) in primary biliary cirrhosis (PBC)

M. Feuchtinger, J. Dengjel, S. Stevanovic, R. Klein

Journal:

Journal of Hepatology

Year:

2004

Language:

english

File:

PDF, 61 KB

english, 2004

24

[675] IDENTIFICATION OF THE BETA- AND DELTA-SUBUNITS OF THE FOF1-ATPASE COMPLEX AS FURTHER MITOCHONDRIAL ANTIGENS IN PRIMARY BILIARY CIRRHOSIS (PBC)

B. Preuss, M. Feuchtinger, i. Dengjel, S. Stevanovic, R. Klein

Journal:

Journal of Hepatology

Year:

2007

Language:

english

File:

PDF, 152 KB

english, 2007

25

Systems Biology and Bioinformatics in Aging Research: A Workshop Report

Fuellen, Georg, Dengjel, Jörn, Hoeflich, Andreas, Hoeijemakers, Jan, Kestler, Hans A., Kowald, Axel, Priebe, Steffen, Rebholz-Schuhmann, Dietrich, Schmeck, Bernd, Schmitz, Ulf, Stolzing, Alexandra, Sü

Journal:

Rejuvenation Research

Year:

2012

Language:

english

File:

PDF, 235 KB

english, 2012

26

Comparative quantitation of proteome alterations induced by aging or immortalization in primary human fibroblasts and keratinocytes for clinical applications

Sprenger, Adrian, Küttner, Victoria, Biniossek, Martin L., Gretzmeier, Christine, Boerries, Melanie, Mack, Claudia, Has, Cristina, Bruckner-Tuderman, Leena, Dengjel, Jörn

Journal:

Molecular BioSystems

Year:

2010

Language:

english

File:

PDF, 1.33 MB

english, 2010

27

Antagonism of arachidonic acid-induced bronchoconstriction in cats by aspirin-like analgesics

Hans-Hasso Frey, Christian Dengjel

Journal:

European Journal of Pharmacology

Year:

1976

Language:

english

File:

PDF, 390 KB

english, 1976

28

Census of cytosolic aminopeptidase activity reveals two novel cytosolic aminopeptidases

Nadja Akkad, Mark Schatz, Jörn Dengjel, Stefan Tenzer, Hansjörg Schild

Journal:

Medical Microbiology and Immunology

Year:

2012

Language:

english

File:

PDF, 786 KB

english, 2012

29

Effects of inhibitors of thromboxane synthesis on reactions of the cat bronchus in situ to prostaglandins

Hans-Hasso Frey, Christian Dengjel

Journal:

Year:

1980

Language:

english

File:

PDF, 329 KB

english, 1980

30

mTOR inhibits autophagy by controlling ULK1 ubiquitylation, self-association and function through AMBRA1 and TRAF6

Nazio, Francesca, Strappazzon, Flavie, Antonioli, Manuela, Bielli, Pamela, Cianfanelli, Valentina, Bordi, Matteo, Gretzmeier, Christine, Dengjel, Joern, Piacentini, Mauro, Fimia, Gian Maria, Cecconi,

Journal:

Nature Cell Biology

Year:

2013

Language:

english

File:

PDF, 3.91 MB

english, 2013

31

Receptor tyrosine kinase signaling: a view from quantitative proteomics

Dengjel, Joern, Kratchmarova, Irina, Blagoev, Blagoy

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 1.57 MB

english, 2009

32

Mass Spectrometry Analysis and Quantitation of Peptides Presented on the MHC II Molecules of Mouse Spleen Dendritic Cells

Bozzacco, Leonia, Yu, Haiqiang, A. Zebroski, Henry, Dengjel, Jörn, Deng, Haiteng, Mojsov, Svetlana, Steinman, Ralph M.

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 3.70 MB

english, 2011

33

Involvement of mitochondrial dynamics in the segregation of mitochondrial matrix proteins during stationary phase mitophagy

Abeliovich, Hagai, Zarei, Mostafa, Rigbolt, Kristoffer T. G., Youle, Richard J., Dengjel, Joern

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 2.84 MB

english, 2013

34

Musical chairs during mitophagy

Dengjel, Jörn, Abeliovich, Hagai

Journal:

Year:

2014

Language:

english

File:

PDF, 589 KB

english, 2014

35

Autophagy promotes MHC class II presentation of peptides from intracellular source proteins

Dengjel, J., Schoor, O., Fischer, R., Reich, M., Kraus, M., Muller, M., Kreymborg, K., Altenberend, F., Brandenburg, J., Kalbacher, H., Brock, R., Driessen, C., Rammensee, H.-G., Stevanovic, S.

Journal:

Proceedings of the National Academy of Sciences

Year:

2005

Language:

english

File:

PDF, 342 KB

english, 2005

36

196: System-wide characterization of dynamics of cytosolic macromolecular protein complexes during oncogene-induced cell transformation

Diedrich, B., Rigbolt, K.G., Bestmann, S., Brummer, T., Dengjel, J.

Journal:

European Journal of Cancer

Year:

2014

Language:

english

File:

PDF, 81 KB

english, 2014

37

The Quantitative Nuclear Matrix Proteome as a Biochemical Snapshot of Nuclear Organization

Engelke, Rudolf, Riede, Julia, Hegermann, Jan, Wuerch, Andreas, Eimer, Stefan, Dengjel, Joern, Mittler, Gerhard

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 5.15 MB

english, 2014

38

Comparison of ERLIC–TiO 2 , HILIC–TiO 2 , and SCX–TiO 2 for Global Phosphoproteomics Approaches

Zarei, Mostafa, Sprenger, Adrian, Metzger, Fabian, Gretzmeier, Christine, Dengjel, Joern

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 4.18 MB

english, 2011

39

Combinatorial Use of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) and Strong Cation Exchange (SCX) Chromatography for In-Depth Phosphoproteome Analysis

Zarei, Mostafa, Sprenger, Adrian, Gretzmeier, Christine, Dengjel, Joern

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.07 MB

english, 2012

40

Rapid Combinatorial ERLIC–SCX Solid-Phase Extraction for In-Depth Phosphoproteome Analysis

Zarei, Mostafa, Sprenger, Adrian, Gretzmeier, Christine, Dengjel, Joern

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 866 KB

english, 2013

41

Protein yoctowell nanoarchitectures: assembly of donut shaped protein containers and nanofibres

Schreiber, Andreas, Zaitseva, Ekaterina, Thomann, Yi, Thomann, Ralf, Dengjel, Jörn, Hanselmann, Ralf, Schiller, Stefan M.

Journal:

Year:

2011

Language:

english

File:

PDF, 303 KB

english, 2011

42

The Degradative Inventory of the Cell: Proteomic Insights

Engelke, Rudolf, Becker, Andrea C., Dengjel, Jörn

Journal:

Antioxidants & Redox Signaling

Year:

2012

Language:

english

File:

PDF, 663 KB

english, 2012

43

RhoA activation by CNFy restores cell-cell adhesion in kindlin-2-deficient keratinocytes

He, Yinghong, Sonnenwald, Tanja, Sprenger, Adrian, Hansen, Uwe, Dengjel, Joern, Bruckner-Tuderman, Leena, Schmidt, Gudula, Has, Cristina

Journal:

The Journal of Pathology

Year:

2014

Language:

english

File:

PDF, 3.73 MB

english, 2014

44

Global remodelling of cellular microenvironment due to loss of collagen VII

Kuttner, V., Mack, C., Rigbolt, K. T., Kern, J. S., Schilling, O., Busch, H., Bruckner-Tuderman, L., Dengjel, J.

Journal:

Molecular Systems Biology

Year:

2014

Language:

english

File:

PDF, 781 KB

english, 2014

45

AMBRA1 Interplay with Cullin E3 Ubiquitin Ligases Regulates Autophagy Dynamics

Antonioli, Manuela, Albiero, Federica, Nazio, Francesca, Vescovo, Tiziana, Perdomo, Ariel Basulto, Corazzari, Marco, Marsella, Claudia, Piselli, Pierluca, Gretzmeier, Christine, Dengjel, Jörn, Cecconi

Journal:

Developmental Cell

Year:

2014

Language:

english

File:

PDF, 2.53 MB

english, 2014

46

Loss of Collagen VII Is Associated with Reduced Transglutaminase 2 Abundance and Activity

Küttner, Victoria, Mack, Claudia, Gretzmeier, Christine, Bruckner-Tuderman, Leena, Dengjel, Jörn

Journal:

The Journal of Investigative Dermatology

Year:

2014

Language:

english

File:

PDF, 4.75 MB

english, 2014

47

Anks3 interacts with nephronophthisis proteins and is required for normal renal development

Yakulov, Toma A, Yasunaga, Takayuki, Ramachandran, Haribaskar, Engel, Christina, Müller, Barbara, Hoff, Sylvia, Dengjel, Jörn, Lienkamp, Soeren S, Walz, Gerd

Journal:

Kidney International

Year:

2015

Language:

english

File:

PDF, 1.58 MB

english, 2015

48

Cyclin O (Ccno) functions during deuterosome-mediated centriole amplification of multiciliated cells

Funk, M. C., Bera, A. N., Menchen, T., Kuales, G., Thriene, K., Lienkamp, S. S., Dengjel, J., Omran, H., Frank, M., Arnold, S. J.

Journal:

The EMBO Journal

Year:

2015

Language:

english

File:

PDF, 2.29 MB

english, 2015

49

Quantitative Analysis of Prion-Protein Degradation by Constitutive and Immuno-20S Proteasomes Indicates Differences Correlated with Disease Susceptibility

Tenzer, S., Stoltze, L., Schonfisch, B., Dengjel, J., Muller, M., Stevanovic, S., Rammensee, H.-G., Schild, H.

Journal:

The Journal of Immunology

Year:

2004

Language:

english

File:

PDF, 517 KB

english, 2004

50

Consistency of the Proteome in Primary Human Keratinocytes With Respect to Gender, Age, and Skin Localization

Sprenger, A., Weber, S., Zarai, M., Engelke, R., Nascimento, J. M., Gretzmeier, C., Hilpert, M., Boerries, M., Has, C., Busch, H., Bruckner-Tuderman, L., Dengjel, J.

Journal:

Molecular & Cellular Proteomics

Year:

2013

Language:

english

File:

PDF, 2.60 MB

english, 2013